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Link to this page No. Title Subset A vs. Subset B Type Up Fold(A/B) Down Fold(A/B) q value(Avg.) 1 Transcription factor Zfx deficiency effect on embryonic and hematopoietic stem cells  embryonic stem cell vs. hematopoietic stem cell cell type 619.0 Symbol Fold Lin28 142.857 Nanog 1000 Pou5f1 333.333 Sox2 1000 0.0 Symbol Fold 0.0060 Symbol q value Lin28 0.006 Nanog 0.006 Pou5f1 0.006 Sox2 0.006 2 Sex specific transcription in somatic and reproductive tissues  hypothalamus vs. liver tissue 19.1 Symbol Fold Lin28 1.67224 Nanog 1.52905 Pou5f1 1.78891 Sox2 71.4286 0.0 Symbol Fold 0.0088 Symbol q value Lin28 0.007 Nanog 0.026 Pou5f1 0.002 Sox2 0 3 Gonadal somatic cells during the critical period of sex determination: time course  10.5 dpc vs. 11.5 dpc age 5.0 Symbol Fold Lin28 4.5045 Nanog 2.48139 Pou5f1 3.20513 Sox2 9.70874 0.0 Symbol Fold 0.0168 Symbol q value Lin28 0.006 Nanog 0.012 Pou5f1 0.036 Sox2 0.013 4 Transcription factors Nanog and Oct4 knockdown effect on embryonic stem cells  Control vs. Oct4 knockdown protocol 1.2 Symbol Fold Lin28 1.11857 Nanog 1.14416 Pou5f1 1.26422 Sox2 1.17647 0.0 Symbol Fold 0.0105 Symbol q value Lin28 0.016 Nanog 0.011 Pou5f1 0.006 Sox2 0.009 5 Stearoyl-CoA desaturase 1-deficient mutants on a very low-fat, high-carbohydrate diet: liver expression profile  wild type vs. Scd1 null genotype/variation 1.1 Symbol Fold Lin28 1.10988 Nanog 1.13895 Pou5f1 1.09409 Sox2 1.10132 0.0 Symbol Fold 0.0173 Symbol q value Lin28 0.024 Nanog 0.01 Pou5f1 0.029 Sox2 0.006

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