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No.TitleSubset A vs. Subset BType Up Fold(A/B) Down Fold(A/B)q value(Avg.)
1Expression data from different research centers universal RNA vs. livertissue28.70.00.0060
2Expression data from different research centers universal RNA vs. spleentissue15.90.00.0083
3Expression data from different research centers universal RNA vs. kidneytissue9.70.00.0020
4Teratozoospermia (HG-U133 2.0 ) teratozoospermia vs. normaldisease state8.20.00.0000
5Immortalized endothelial cell line response to atorvastatin primary vs. immortalizedcell line6.70.00.0063
6Cutaneous malignant melanoma normal vs. malignant melanomadisease state6.20.00.0060
7Hematopoietic stem cell engraftment in goat Capra hircus vs. Homo sapiensspecies6.10.00.0127
8Whole blood RNA isolation and leukocyte RNA purification: comparison of methods PAXgene vs. buffy coatprotocol4.20.00.0143
9Whole blood RNA isolation and leukocyte RNA purification: comparison of methods whole blood vs. leukocytetissue4.20.00.0143
10Presymptomatic and symptomatic malaria: peripheral blood mononuclear cells uninfected vs. symptomatic, naturally acquireddisease state3.30.00.0000
11Presymptomatic and symptomatic malaria: peripheral blood mononuclear cells uninfected baseline vs. acute infectioninfection3.30.00.0000
12Plasma cell dyscrasias monoclonal gammopathy of undetermined significance vs. plasma cell leukemiadisease state2.70.00.0273
13Various normal pure cell cultures epithelial vs. endothelialcell type2.60.00.0047
14Various normal pure cell cultures epithelial vs. smooth musclecell type2.60.00.0037
15Glioma-derived stem cell factor effect on angiogenesis in the brain oligodendrogliomas vs. non-tumordisease state2.30.00.0083
16Glioma-derived stem cell factor effect on angiogenesis in the brain tumor grade II vs. not applicabletissue2.30.00.0083
17Carcinoma in situ lesions of the urinary bladder normal urothelium vs. superficial transitional cell carcinoma w/ surrounding carcinoma in situ lesionspecimen1.90.00.0007
18Carcinoma in situ lesions of the urinary bladder carcinoma in situ lesion vs. superficial transitional cell carcinoma w/ surrounding carcinoma in situ lesionspecimen1.90.00.0147
19Carcinoma in situ lesions of the urinary bladder carcinoma in situ lesion vs. muscle invasive carcinomaspecimen1.80.00.0133
20Carcinoma in situ lesions of the urinary bladder normal urothelium vs. muscle invasive carcinomaspecimen1.70.00.0007
21Gliomas of grades III and IV (HG-U133A) grade III glioma vs. grade IV gliomadisease state1.50.00.0267
22Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 70 vs. 32individual1.30.00.0423
23Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 70 vs. 48individual1.30.00.0367
24Non-diseased lung tissue Caucasian vs. African Americanother1.20.00.0207
25Interferons effect on endothelial cells fibroblasts vs. endothelial cellscell type1.20.00.0070
26Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 89 vs. 53individual1.20.00.0357
27Large airway epithelial cells from cigarette smokers with suspect lung cancer suspect cancer vs. cancerdisease state1.10.00.0043
28Large airway epithelial cells from cigarette smokers with suspect lung cancer suspect cancer vs. no cancerdisease state1.10.00.0040
29Waldenstrom's macroglobulinemia: B lymphocytes and plasma cells normal vs. multiple myelomadisease state1.10.00.0020
30Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 88 vs. 53individual1.10.00.0070
31Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 70 vs. 53individual1.10.00.0217
32Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 75 vs. 32individual1.10.00.0317
33Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 59 vs. 53individual1.10.00.0453
34Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 88 vs. 48individual1.10.00.0187
35Tamoxifen effect on breast cancer cell line expressing estrogen receptor alpha and beta adenovirus carrying estrogen receptor beta vs. control adenovirusinfection1.10.00.0300
36Waldenstrom's macroglobulinemia: B lymphocytes and plasma cells normal vs. chronic lymphocytic leukemiadisease state1.10.00.0183
37Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 75 vs. 53individual1.10.00.0123
38Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 75 vs. 48individual1.10.00.0283
39Transmigrated neutrophils in the alveolar space of endotoxin-exposed lung 70 vs. 37individual1.10.00.0353
40Waldenstrom's macroglobulinemia: B lymphocytes and plasma cells Waldenstrom's macroglobulinemia vs. multiple myelomadisease state1.10.00.0197
41Blood response to various beverages: time course IF vs. MBindividual1.10.00.0150
42Gefitinib effect on various non-small cell lung cancer cell lines (HG-U133A) test set vs. training setprotocol1.00.00.0007
43Heat shock transcription factor HSF1 depleted cells response to heat shock: time course siHSF1_2 vs. siHSF1_1agent1.00.00.0100
44Blood response to various beverages: time course CJ vs. MBindividual1.00.00.0163
45Blood response to various beverages: time course JR vs. MBindividual1.00.00.0100
46Heat shock transcription factor HSF1 depleted cells response to heat shock: time course siLuc vs. siHSF1_1agent1.00.00.0133
47Blood response to various beverages: time course CM vs. MBindividual1.00.00.0160
482-(3,4,5-trimethoxyphenylamino)-pyrrolo[2,3-d]pyrimidine effect on epidermal keratinocytes: time course 12 h vs. 36 htime1.00.00.0113
49Vanadium pentoxide effect on lung fibroblasts: time course V205 vs. H202agent1.00.00.0187
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