Single Gene search
|
Multiple Gene search
|
Download
|
Registration
|
Help
|
Contact
|
AILUN
|
fitSNPs
|
GeneChaser 1.0
Display Results :
Graphical
Textual
Sort By
q value
Fold
Title
Rank
Species
Show
10
20
50
100
200
500
Filter with:
q value
<=0.05
<=0.03
<=0.01
<=0.005
<=0.001
Fold
All
up
down
Rank
All
>95%ile
>90%ile
>75%ile
>50%ile
>25%ile
Select Comparisons
Disease vs. control comparison only
All
None
Age
Developmental Stage
Infection
Population
Stress
Bio Source
Differentiation State
Irradiation
Protocol
Survival
Cell Line
Disease State
Light Intensity
Replicate
Temperature
Cell Type
Environmental
Material Type
RNA
Time
Chromosome
Family History
Organism
Sample
Tissue
Clinical Information
Genotype
Other
Sex
Treatment
Compound
Growth Condition
Phase
Stimulus
Days
Individual
Phenotype
Strain
Items 1 - 5 of 5 significant comparisons.
of 1
HomoloGene group
78027
for NANOG,Nanog homeobox was differentially expressed in 5 of 5706 comparisons.
Link to this page
Start Over
Legends
Enter Entrez Gene ID/Symbol/Gene Identifier
q value :
?>
0.05
0.03
0.01
0.005
0.001
Include studies in other species:
Bar Length
Fold change (max at fold ≥ 256)
Bar Width
Directly proportional to Rank (Rank percentile among all differentially expressed genes in each study).
Mouseover
Study title, fold change, Rank, q value .
Bar color
q value
q value range
Color code
<0.001
Red
0.001 - < 0.0025
Tomato
0.0025 - < 0.005
Light Salmon
0.005 - < 0.0075
Orange
0.0075 - < 0.01
Yellow
0.01 - < 0.02
GreenYellow
0.02 - < 0.3
LightGreen
0.03 - < 0.04
SpringGreen
0.04 - < 0.05
DarkGreen
Click No.
To open microarray study with reference.
Click title
To open genes for the corresponding comparison - GeneCentric page.
Fold
Scale for measuring the foldchange value.
No.
Species Name
Title
Differential Expression (A
vs.
B)
Regulation
Type
Fold (A/B)
Rank (%ile)
q value
Fold
2
4
8
16
32
64
128
256
1
Homo sapiens
Transcription profiling of human male vastus lateralis muscle samples from healthy and COPD subjects before and after 3 months of training
Up
DiseaseState
2.2077
49.72
0.0228
chronic obstructive pulmonary disease
vs.
normal
2
Mus musculus
Transcription profiling of various mouse tissues and cell types using the Affymetrix MG_U74Av2 platform
Down
DISEASE_STATE
0.7283
28.5
0.0013
acute myocardial infarction
vs.
reference
3
Mus musculus
Transcription profiling of various mouse tissues and cell types using the Affymetrix MG_U74Av2 platform
Up
COMPOUND
1.0602
51.88
0.0001
ethanol
vs.
control
4
Mus musculus
Transcription profiling of various mouse tissues and cell types using the Affymetrix MG_U74Av2 platform
Down
DISEASE_STATE
0.9575
69.67
0.0273
myocardial infarction
vs.
reference
5
Mus musculus
Transcription profiling of various mouse tissues and cell types using the Affymetrix MG_U74Av2 platform
Up
COMPOUND
0.9654
94.86
0.0135
dexamethasone
vs.
control
Fold
2
4
8
16
32
64
128
256
Display Results :
Graphical
Textual
Sort By
q value
Fold
Title
Rank
Species
Show
10
20
50
100
200
500
Filter with:
q value
<=0.05
<=0.03
<=0.01
<=0.005
<=0.001
Fold
All
up
down
Rank
All
>95%ile
>90%ile
>75%ile
>50%ile
>25%ile
Select Comparisons
Disease vs. control comparison only
Copyright ©2008 All Rights Reserved. Comments & Questions to Butte Lab,
Webmaster
. Last updated on February 23 2010